Molecule Information
General Information of the Molecule (ID: Mol01416)
Name |
hsa-mir-125b
,Homo sapiens
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Synonyms |
microRNA 125b-1
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Molecule Type |
Precursor miRNA
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Gene Name |
MIR125B1
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Gene ID | |||||
Location |
chr11:122099757-122099844[-]
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Sequence |
UGCGCUCCUCUCAGUCCCUGAGACCCUAACUUGUGAUGUUUACCGUUUAAAUCCACGGGU
UAGGCUCUUGGGAGCUGCGAGUCGUGCU Click to Show/Hide
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Ensembl ID | |||||
HGNC ID | |||||
Precursor Accession | |||||
Click to Show/Hide the Complete Species Lineage | |||||
Type(s) of Resistant Mechanism of This Molecule
EADR: Epigenetic Alteration of DNA, RNA or Protein
RTDM: Regulation by the Disease Microenvironment
Drug Resistance Data Categorized by Drug
Approved Drug(s)
13 drug(s) in total
Cetuximab
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Colorectal cancer | [1] | |||
Resistant Disease | Colorectal cancer [ICD-11: 2B91.1] | |||
Resistant Drug | Cetuximab | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Wnt/Beta-catenin signaling pathway | Inhibition | hsa04310 | |
In Vitro Model | HT29 Cells | Colon | Homo sapiens (Human) | CVCL_A8EZ |
SW480 cells | Colon | Homo sapiens (Human) | CVCL_0546 | |
DLD1 cells | Colon | Homo sapiens (Human) | CVCL_0248 | |
SW620 cells | Colon | Homo sapiens (Human) | CVCL_0547 | |
CaCo2 cells | Colon | Homo sapiens (Human) | CVCL_0025 | |
HCT116 cells | Colon | Homo sapiens (Human) | CVCL_0291 | |
LOVO cells | Colon | Homo sapiens (Human) | CVCL_0399 | |
RkO cells | Colon | Homo sapiens (Human) | CVCL_0504 | |
HCT8 cells | Colon | Homo sapiens (Human) | CVCL_2478 | |
NCI-H508 cells | Colon | Homo sapiens (Human) | CVCL_1564 | |
SW1116 cells | Colon | Homo sapiens (Human) | CVCL_0544 | |
COLO 320DM cells | Colon | Homo sapiens (Human) | CVCL_0219 | |
HCT15 cells | Colon | Homo sapiens (Human) | CVCL_0292 | |
LS174T cells | Colon | Homo sapiens (Human) | CVCL_1384 | |
NCI-H716 cells | Colon | Homo sapiens (Human) | CVCL_1581 | |
SW948 cells | Colon | Homo sapiens (Human) | CVCL_0632 | |
SW403 cells | Colon | Homo sapiens (Human) | CVCL_0545 | |
SW48 cells | Colon | Homo sapiens (Human) | CVCL_1724 | |
COLO205 cells | Colon | Homo sapiens (Human) | CVCL_F402 | |
HuTu80 cells | Small intestine | Homo sapiens (Human) | CVCL_1301 | |
LS123 cells | Colon | Homo sapiens (Human) | CVCL_1383 | |
SK-CO-1 cells | Colon | Homo sapiens (Human) | CVCL_0626 | |
SW837 cells | Colon | Homo sapiens (Human) | CVCL_1729 | |
T84 cells | Colon | Homo sapiens (Human) | CVCL_0555 | |
In Vivo Model | Nude mouse xenograft model | Mus musculus | ||
Experiment for Molecule Alteration |
Luciferase reporter assay; qRT-PCR | |||
Experiment for Drug Resistance |
CCK8 assay | |||
Mechanism Description | miR100 and miR125b coordinately repressed five Wnt/beta-catenin negative regulators, resulting in increased Wnt signaling, and Wnt inhibition in cetuximab-resistant cells restored cetuximab responsiveness. | |||
Disease Class: Colorectal cancer | [1] | |||
Resistant Disease | Colorectal cancer [ICD-11: 2B91.1] | |||
Resistant Drug | Cetuximab | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Wnt/Beta-catenin signaling pathway | Activation | hsa04310 | |
In Vitro Model | MDA-MB-231 cells | Breast | Homo sapiens (Human) | CVCL_0062 |
GIST-T1 cells | Gastric | Homo sapiens (Human) | CVCL_4976 | |
CAL62 cells | Thyroid gland | Homo sapiens (Human) | CVCL_1112 | |
CAL-62 cells | Thyroid gland | Homo sapiens (Human) | CVCL_1112 | |
CCL-131 cells | Brain | Mus musculus (Mouse) | CVCL_0470 | |
COLO320DM cells | Colon | Homo sapiens (Human) | CVCL_0219 | |
CT26 WT cells | Colon | Mus musculus (Mouse) | CVCL_7256 | |
Detroit562 cells | Pleural effusion | Homo sapiens (Human) | CVCL_1171 | |
DIPG 007 cells | Brain | Homo sapiens (Human) | CVCL_VU70 | |
DLD-1 cells | Colon | Homo sapiens (Human) | CVCL_0248 | |
DU145 cells | Prostate | Homo sapiens (Human) | CVCL_0105 | |
FL83B cells | Liver | Mus musculus (Mouse) | CVCL_4691 | |
GH3 cells | Pituitary gland | Rattus norvegicus (Rat) | CVCL_0273 | |
GH4C1 cells | pituitary gland | Rattus norvegicus (Rat) | CVCL_0276 | |
H1650 cells | Pleural effusion | Homo sapiens (Human) | CVCL_4V01 | |
H9 cells | Peripheral blood | Homo sapiens (Human) | CVCL_1240 | |
H9/HTLV cells | Peripheral blood | Homo sapiens (Human) | CVCL_3514 | |
HEK 293T cells | Kidney | Homo sapiens (Human) | CVCL_0063 | |
HeLa S cells | Uterus | Homo sapiens (Human) | CVCL_0058 | |
HeLa229 cells | Uterus | Homo sapiens (Human) | CVCL_1276 | |
HH cells | Peripheral blood | Homo sapiens (Human) | CVCL_1280 | |
HPrEC cells | Prostate | Homo sapiens (Human) | CVCL_A2EM | |
Human RPMI8226 myeloma cells | Peripheral blood | Homo sapiens (Human) | CVCL_0014 | |
KB-C2 cells | Uterus | Homo sapiens (Human) | CVCL_D600 | |
Experiment for Molecule Alteration |
RT-PCR | |||
Mechanism Description | miR-100HG, miR-100 and miR-125b overexpression was also observed in cetuximab-resistant colorectal cancer and head and neck squamous cell cancer cell lines and in tumors from colorectal cancer patients that progressed on cetuximab. miR-100 and miR-125b coordinately repressed five Wnt/beta-catenin negative regulators, resulting in increased Wnt signaling, and Wnt inhibition in cetuximab-resistant cells restored cetuximab responsiveness. |
Cisplatin
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Nasopharyngeal carcinoma | [2] | |||
Resistant Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B.0] | |||
Resistant Drug | Cisplatin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
p53 signaling pathway | Inhibition | hsa04115 | ||
In Vitro Model | CNE1 cells | Throat | Homo sapiens (Human) | CVCL_6888 |
CNE-2 cells | Nasopharynx | Homo sapiens (Human) | CVCL_6888 | |
TW03 cells | Nasopharynx | Homo sapiens (Human) | CVCL_6010 | |
Experiment for Molecule Alteration |
RT-qPCR | |||
Experiment for Drug Resistance |
CCK8 assay | |||
Mechanism Description | In the TW03/DDP cells, the expression levels of miR 125a and miR 125b were upregulated, and this caused downregulation of p53. Ectopic expression of these miRNAs in the TW03 cell model sensitized TW03 to cisplatin by decreasing the protein expression levels of p53, whereas ectopic expression in the antisense oligos of these microRNAs demonstrated the opposite effect. In addition, the present demonstrated that the cisplatin induced expression of miR 125a and miR 125b inhibited cisplatin induced apoptosis in the TW03 cells by decreasing the protein expression levels of p53. Taken together, the present study revealed for the first time, to the best of our knowledge, that induction of the expression of miR 125a and miR 125b by treatment with cisplatin resulted in resistance to the cisplatin drug in the NPC cells. | |||
Disease Class: Ovarian cancer | [3] | |||
Resistant Disease | Ovarian cancer [ICD-11: 2C73.0] | |||
Resistant Drug | Cisplatin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
In Vitro Model | OV2008 cells | Ovary | Homo sapiens (Human) | CVCL_0473 |
Experiment for Molecule Alteration |
RT-PCR | |||
Experiment for Drug Resistance |
CCK8 assay | |||
Mechanism Description | Bak1 was a direct target of miR-125b, and down-regulation of Bak1 suppressed cisplatin-induced apoptosis and led to an increased resistance to cisplatin. miR-125b has a sig-nificantly promoting effect on chemoresistance of C13* cells and up-regulation of miR-125b expression contributes to cisplatin resistance through suppression of Bak1 expression. |
Drug Sensitivity Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Nasopharyngeal carcinoma | [4] | |||
Sensitive Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B.0] | |||
Sensitive Drug | Cisplatin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Revealed Based on the Cell Line Data | |||
In Vitro Model | CNE2 cells | Nasopharynx | Homo sapiens (Human) | CVCL_6889 |
CNE2/DDP cells | Nasopharynx | Homo sapiens (Human) | CVCL_6889 | |
Experiment for Molecule Alteration |
RT-qPCR | |||
Experiment for Drug Resistance |
MTS assay; Flow cytometry assay-directed annexin V-fluorescein isothiocyanate (FITC)/propidium iodide (PI) assay | |||
Mechanism Description | microRNA-125b reverses the multidrug resistance of nasopharyngeal carcinoma cells via targeting of Bcl-2. | |||
Disease Class: Gastric cancer | [5] | |||
Sensitive Disease | Gastric cancer [ICD-11: 2B72.1] | |||
Sensitive Drug | Cisplatin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell viability | Inhibition | hsa05200 | |
In Vitro Model | BGC-823 cells | Gastric | Homo sapiens (Human) | CVCL_3360 |
MGC-803 cells | Gastric | Homo sapiens (Human) | CVCL_5334 | |
SGC7901 cells | Gastric | Homo sapiens (Human) | CVCL_0520 | |
AGS cells | Gastric | Homo sapiens (Human) | CVCL_0139 | |
HGC27 cells | Gastric | Homo sapiens (Human) | CVCL_1279 | |
NCI-N87 cells | Gastric | Homo sapiens (Human) | CVCL_1603 | |
MkN-45 cells | Gastric | Homo sapiens (Human) | CVCL_0434 | |
In Vivo Model | Nude mouse xenograft model | Mus musculus | ||
Experiment for Molecule Alteration |
RT-PCR | |||
Experiment for Drug Resistance |
CCK8 assay | |||
Mechanism Description | Overexpression of miR-125b improved the chemosensitivity of DDP in HGC-27 and MGC-803 cells and miR-125b obviously inhibited the expression of HER2 at protein level in HGC-27 and MGC-803 cells. | |||
Disease Class: Osteosarcoma | [6] | |||
Sensitive Disease | Osteosarcoma [ICD-11: 2B51.0] | |||
Sensitive Drug | Cisplatin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell invasion | Inhibition | hsa05200 | |
Cell migration | Inhibition | hsa04670 | ||
Cell proliferation | Inhibition | hsa05200 | ||
p53/p38/MAPK signaling pathway | Regulation | hsa04010 | ||
In Vitro Model | MG63 cells | Bone marrow | Homo sapiens (Human) | CVCL_0426 |
SAOS-2 cells | Bone marrow | Homo sapiens (Human) | CVCL_0548 | |
U2OS cells | Bone | Homo sapiens (Human) | CVCL_0042 | |
HOS cells | Bone | Homo sapiens (Human) | CVCL_0312 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
CCK8 assay | |||
Mechanism Description | Overexpression of miR-125b inhibited proliferation, migration, and invasion of OS cells and reduced the chemotherapy resistance of OS cells to cisplatin by targeting Bcl-2. |
Cyclophosphamide
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Breast cancer | [7], [8] | |||
Resistant Disease | Breast cancer [ICD-11: 2C60.3] | |||
Resistant Drug | Cyclophosphamide | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | p53 signaling pathway | Inhibition | hsa04115 | |
In Vitro Model | MCF-7 cells | Breast | Homo sapiens (Human) | CVCL_0031 |
MDA-MB-231 cells | Breast | Homo sapiens (Human) | CVCL_0062 | |
T47D cells | Breast | Homo sapiens (Human) | CVCL_0553 | |
BT20 cells | Breast | Homo sapiens (Human) | CVCL_0178 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
Sphere formation assay | |||
Mechanism Description | E2F3, and in some settings E2F1, induce apoptosis through p53-dependent or -independent pathways, Overexpression of miR-125b in MCF-7 cells significantly down-regulated E2F3 protein level, overexpression of miR-125b caused a marked inhibition of anticancer drug activity and increased resistance in breast cancer cells in vitro. And elevated miR-125b expression in chemoresistant cancer cells were due to high percentage of SP cells. |
Daunorubicin
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Leukemia | [9] | |||
Resistant Disease | Leukemia [ICD-11: 2B33.6] | |||
Resistant Drug | Daunorubicin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
In Vitro Model | THP-1 cells | Blood | Homo sapiens (Human) | CVCL_0006 |
Jurkat cells | Pleural effusion | Homo sapiens (Human) | CVCL_0065 | |
K562 cells | Blood | Homo sapiens (Human) | CVCL_0004 | |
REH cells | Bone marrow | Homo sapiens (Human) | CVCL_1650 | |
Experiment for Molecule Alteration |
qPCR | |||
Experiment for Drug Resistance |
Luminescent cell viability assay | |||
Mechanism Description | miR-125b downregulated GRk2 and PUMA, which inhibited apoptosis and induced leukemia cell resistance to DNR. |
Doxorubicin
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Breast cancer | [10] | |||
Resistant Disease | Breast cancer [ICD-11: 2C60.3] | |||
Resistant Drug | Doxorubicin | |||
Molecule Alteration | Expression | Down-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
In Vitro Model | MCF-7 cells | Breast | Homo sapiens (Human) | CVCL_0031 |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
MTT assay | |||
Mechanism Description | Compared to the breast cancer tissues from chemotherapy responders, 10 miRNAs were identified to be dysregulated in the chemoresistant breast cancer tissues. Three of these miRNAs were up-regulated (miR-141, miR-200c, and miR-31), and 7 were down-regulated (let-7e, miR-576-3p, miR-125b-1, miR-370, miR-145, miR-765, and miR-760). | |||
Disease Class: Ewing sarcoma | [11] | |||
Resistant Disease | Ewing sarcoma [ICD-11: 2B52.0] | |||
Resistant Drug | Doxorubicin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
miR125b-p53/BAKT signaling pathway | Activation | hsa05206 | ||
In Vitro Model | RD-ES cells | Bones | Homo sapiens (Human) | CVCL_2169 |
Sk-ES cells | Bones | Homo sapiens (Human) | CVCL_0627 | |
Sk-N-MC cells | Bones | Homo sapiens (Human) | CVCL_0530 | |
TC-71 cells | Bones | Homo sapiens (Human) | CVCL_2213 | |
VH-64 cells | Bones | Homo sapiens (Human) | CVCL_9672 | |
WE-68 cells | Bones | Homo sapiens (Human) | CVCL_9717 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
Celltiter-glo luminescent cell viability assay | |||
Mechanism Description | miR-125b led to the development of chemoresistance by suppressing the expression of p53 and Bak, and repression of miR-125b sensitized EWS cells to apoptosis induced by treatment with various cytotoxic drugs. | |||
Disease Class: Primitive neuroectodermal tumor | [11] | |||
Resistant Disease | Primitive neuroectodermal tumor [ICD-11: 2A00.08] | |||
Resistant Drug | Doxorubicin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
miR125b-p53/BAKT signaling pathway | Activation | hsa05206 | ||
In Vitro Model | RD-ES cells | Bones | Homo sapiens (Human) | CVCL_2169 |
Sk-ES cells | Bones | Homo sapiens (Human) | CVCL_0627 | |
Sk-N-MC cells | Bones | Homo sapiens (Human) | CVCL_0530 | |
TC-71 cells | Bones | Homo sapiens (Human) | CVCL_2213 | |
VH-64 cells | Bones | Homo sapiens (Human) | CVCL_9672 | |
WE-68 cells | Bones | Homo sapiens (Human) | CVCL_9717 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
Celltiter-glo luminescent cell viability assay | |||
Mechanism Description | miR-125b led to the development of chemoresistance by suppressing the expression of p53 and Bak, and repression of miR-125b sensitized EWS cells to apoptosis induced by treatment with various cytotoxic drugs. | |||
Disease Class: Acute promyelocytic leukemia | [12] | |||
Resistant Disease | Acute promyelocytic leukemia [ICD-11: 2A60.2] | |||
Resistant Drug | Doxorubicin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
Cell proliferation | Activation | hsa05200 | ||
In Vitro Model | HL60 cells | Peripheral blood | Homo sapiens (Human) | CVCL_0002 |
K562 cells | Blood | Homo sapiens (Human) | CVCL_0004 | |
NB4 cells | Bone marrow | Homo sapiens (Human) | CVCL_0005 | |
In Vivo Model | BALB/c nude mouse xenograft model | Mus musculus | ||
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
CCK8 assay | |||
Mechanism Description | miR-125b could promote leukemic cell proliferation and inhibit cell apoptosis by regulating the expression of tumor suppressor BCL2-antagonist/killer 1 (Bak1). transfection of a miR-125b duplex into AML cells can increase their resistance to therapeutic drugs. |
Drug Sensitivity Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Breast cancer | [13] | |||
Sensitive Disease | Breast cancer [ICD-11: 2C60.3] | |||
Sensitive Drug | Doxorubicin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell apoptosis | Activation | hsa04210 | |
Cell viability | Inhibition | hsa05200 | ||
miR125b/HAX1 signaling pathway | Regulation | hsa05206 | ||
In Vitro Model | MCF-7 cells | Breast | Homo sapiens (Human) | CVCL_0031 |
MDA-MB-231 cells | Breast | Homo sapiens (Human) | CVCL_0062 | |
T47D cells | Breast | Homo sapiens (Human) | CVCL_0553 | |
Experiment for Molecule Alteration |
RT-qPCR | |||
Experiment for Drug Resistance |
MTT assay; Flow cytometry assay | |||
Mechanism Description | Enforced expression of miR-125b resensitizes MCF-7/R cells to DOX via downregulation of HAX-1. | |||
Disease Class: Chondrosarcoma | [14] | |||
Sensitive Disease | Chondrosarcoma [ICD-11: 2B50.0] | |||
Sensitive Drug | Doxorubicin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell apoptosis | Activation | hsa04210 | |
Cell proliferation | Inhibition | hsa05200 | ||
Glucose metabolism signaling pathway | Regulation | hsa05230 | ||
In Vitro Model | CH-2879 cells | Bone | Homo sapiens (Human) | CVCL_9921 |
OUMS-27 cells | Bone | Homo sapiens (Human) | CVCL_3090 | |
SW1353 cells | Bone | Homo sapiens (Human) | CVCL_0543 | |
CS-1 cells | Bone | Homo sapiens (Human) | CVCL_T023 | |
CSPG cells | Bone | Homo sapiens (Human) | N.A. | |
JJ012 cells | Bone | Homo sapiens (Human) | CVCL_D605 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
MTT assay | |||
Mechanism Description | miR-125b was downregulated in chondrosarcoma cells compared with normal human chondrocytes. More importantly, miR-125b was downregulated in doxorubicin resistant cancer cells, with its overexpression enhancing doxorubicin-induced cytotoxicity and apoptosis, subsequently increasing the sensitivity of chondrosarcoma cells to doxorubicin. ErbB2 was a direct target of miR-125b in chondrosarcoma cells. The inhibition of ErbB2 by overexpression of miR-125b led to suppression of glucose metabolism, which rendered chondrosarcoma cells susceptible to doxorubicin. Restoring the expression of ErbB2 and glucose metabolic enzymes recovered doxorubicin resistance in counteracting miR-125b-mediated sensitivity. Taken together, miR-125b plays a critical role in doxorubicin resistance through suppression of ErbB2-induced glucose metabolism, and it may serve as a potential target for overcoming chemoresistance in human chondrosarcoma. | |||
Disease Class: Chondrosarcoma | [14] | |||
Sensitive Disease | Chondrosarcoma [ICD-11: 2B50.0] | |||
Sensitive Drug | Doxorubicin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell viability | Inhibition | hsa05200 | |
In Vitro Model | CH-2879 cells | Bone | Homo sapiens (Human) | CVCL_9921 |
OUMS-27 cells | Bone | Homo sapiens (Human) | CVCL_3090 | |
SW1353 cells | Bone | Homo sapiens (Human) | CVCL_0543 | |
CS-1 cells | Bone | Homo sapiens (Human) | CVCL_T023 | |
CSPG cells | Bone | Homo sapiens (Human) | N.A. | |
JJ012 cells | Bone | Homo sapiens (Human) | CVCL_D605 | |
SNM83 cells | Cartilage | Homo sapiens (Human) | N.A. | |
Experiment for Molecule Alteration |
Western blotting analysis | |||
Experiment for Drug Resistance |
MTT assay | |||
Mechanism Description | miR-143 enhances the antitumor activity of shikonin by targeting BAG3 and reducing its expression in human glioblastoma stem cell. ErbB2. miR-125 was downregulated in chondrosarcoma cells and doxorubicin resistant cells. Overexpression of miR-125 enhanced the sensitivity of both parental and doxorubicin resistant cells to doxorubicin through direct targeting on the ErbB2-mediated upregulation of glycolysis in chondrosarcoma cells. Moreover, restoration of the expression of ErbB2 and glucose metabolic enzymes in miR-125 pretransfected cells recovered the susceptibility to doxorubicin. |
Epirubicin
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Breast cancer | [7] | |||
Resistant Disease | Breast cancer [ICD-11: 2C60.3] | |||
Resistant Drug | Epirubicin | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | p53 signaling pathway | Inhibition | hsa04115 | |
In Vitro Model | MCF-7 cells | Breast | Homo sapiens (Human) | CVCL_0031 |
MDA-MB-231 cells | Breast | Homo sapiens (Human) | CVCL_0062 | |
T47D cells | Breast | Homo sapiens (Human) | CVCL_0553 | |
BT20 cells | Breast | Homo sapiens (Human) | CVCL_0178 | |
Experiment for Molecule Alteration |
RT-PCR | |||
Experiment for Drug Resistance |
Trypan blue dye exclusion assay | |||
Mechanism Description | E2F3, and in some settings E2F1, induce apoptosis through p53-dependent or -independent pathways, Overexpression of miR-125b in MCF-7 cells significantly down-regulated E2F3 protein level, overexpression of miR-125b caused a marked inhibition of anticancer drug activity and increased resistance in breast cancer cells in vitro. |
Etoposide
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Ewing sarcoma | [11] | |||
Resistant Disease | Ewing sarcoma [ICD-11: 2B52.0] | |||
Resistant Drug | Etoposide | |||
Molecule Alteration | Expression | Up-regulation |
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Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
miR125b-p53/BAKT signaling pathway | Activation | hsa05206 | ||
In Vitro Model | RD-ES cells | Bones | Homo sapiens (Human) | CVCL_2169 |
Sk-ES cells | Bones | Homo sapiens (Human) | CVCL_0627 | |
Sk-N-MC cells | Bones | Homo sapiens (Human) | CVCL_0530 | |
TC-71 cells | Bones | Homo sapiens (Human) | CVCL_2213 | |
VH-64 cells | Bones | Homo sapiens (Human) | CVCL_9672 | |
WE-68 cells | Bones | Homo sapiens (Human) | CVCL_9717 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
Celltiter-glo luminescent cell viability assay | |||
Mechanism Description | miR-125b led to the development of chemoresistance by suppressing the expression of p53 and Bak, and repression of miR-125b sensitized EWS cells to apoptosis induced by treatment with various cytotoxic drugs. | |||
Disease Class: Primitive neuroectodermal tumor | [11] | |||
Resistant Disease | Primitive neuroectodermal tumor [ICD-11: 2A00.08] | |||
Resistant Drug | Etoposide | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
miR125b-p53/BAKT signaling pathway | Activation | hsa05206 | ||
In Vitro Model | RD-ES cells | Bones | Homo sapiens (Human) | CVCL_2169 |
Sk-ES cells | Bones | Homo sapiens (Human) | CVCL_0627 | |
Sk-N-MC cells | Bones | Homo sapiens (Human) | CVCL_0530 | |
TC-71 cells | Bones | Homo sapiens (Human) | CVCL_2213 | |
VH-64 cells | Bones | Homo sapiens (Human) | CVCL_9672 | |
WE-68 cells | Bones | Homo sapiens (Human) | CVCL_9717 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
Celltiter-glo luminescent cell viability assay | |||
Mechanism Description | miR-125b led to the development of chemoresistance by suppressing the expression of p53 and Bak, and repression of miR-125b sensitized EWS cells to apoptosis induced by treatment with various cytotoxic drugs. |
Fluorouracil
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Breast cancer | [7], [8] | |||
Resistant Disease | Breast cancer [ICD-11: 2C60.3] | |||
Resistant Drug | Fluorouracil | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | p53 signaling pathway | Inhibition | hsa04115 | |
In Vitro Model | MCF-7 cells | Breast | Homo sapiens (Human) | CVCL_0031 |
MDA-MB-231 cells | Breast | Homo sapiens (Human) | CVCL_0062 | |
T47D cells | Breast | Homo sapiens (Human) | CVCL_0553 | |
BT20 cells | Breast | Homo sapiens (Human) | CVCL_0178 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
Sphere formation assay | |||
Mechanism Description | E2F3, and in some settings E2F1, induce apoptosis through p53-dependent or -independent pathways, Overexpression of miR-125b in MCF-7 cells significantly down-regulated E2F3 protein level, overexpression of miR-125b caused a marked inhibition of anticancer drug activity and increased resistance in breast cancer cells in vitro. And elevated miR-125b expression in chemoresistant cancer cells were due to high percentage of SP cells. |
Drug Sensitivity Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Colorectal cancer | [15] | |||
Sensitive Disease | Colorectal cancer [ICD-11: 2B91.1] | |||
Sensitive Drug | Fluorouracil | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell autophagy | Activation | hsa04140 | |
Wnt/Beta-catenin signaling pathway | Activation | hsa04310 | ||
In Vitro Model | SW620 cells | Colon | Homo sapiens (Human) | CVCL_0547 |
HCT116 cells | Colon | Homo sapiens (Human) | CVCL_0291 | |
In Vivo Model | Nude mouse xenograft model | Mus musculus | ||
Experiment for Molecule Alteration |
RT-qPCR | |||
Experiment for Drug Resistance |
MTT assay; Annexin V-FITC/PI staining assay | |||
Mechanism Description | CXCL12/CXCR4 axis induced miR125b promotes invasion and confers 5-fluorouracil resistance through enhancing autophagy in colorectal cancer There was a negative correlation of the expression of miR125b with APC mRNA in paired human colorectal tissue specimens. The upregulation of miR125b activated the Wnt/beta-catenin signaling by targeting APC gene and contributed to 5-FU resistance through enhancing cell autophagy. | |||
Disease Class: Hepatocellular carcinoma | [16] | |||
Sensitive Disease | Hepatocellular carcinoma [ICD-11: 2C12.2] | |||
Sensitive Drug | Fluorouracil | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell proliferation | Inhibition | hsa05200 | |
In Vitro Model | HepG2 cells | Liver | Homo sapiens (Human) | CVCL_0027 |
THLE-2 cells | Liver | Homo sapiens (Human) | CVCL_3803 | |
THLE-3 cells | Liver | Homo sapiens (Human) | CVCL_3804 | |
Experiment for Molecule Alteration |
RT-PCR | |||
Experiment for Drug Resistance |
MTT assay | |||
Mechanism Description | Compared with 5-FU-sensitive cells, 5-FU-resistant cells exhibited reduced expression levels of miR-125b, and transfection of pre-miR-125b into liver cancer cells resulted in an increased sensitivity of 5-FU-resistant cells to 5-FU. Since drug resistance is a phenotype of malignant cancer cells, the finding that miR-125b expression levels are negatively correlated with 5-FU resistance in HCC cells is consistent with the reported functions of miR-125b. In addition, 5-FU-resistant cells exhibited higher glucose metabolic activity than 5-FU-sensitive cells, and miR-125 was identified to downregulate glucose metabolism by directly targeting Hk II. These results identified miR-125b as a tumor suppressor-like microRNA, which has great potential as a diagnostic and prognostic biomarker. |
Paclitaxel
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Breast cancer | [17] | |||
Resistant Disease | Breast cancer [ICD-11: 2C60.3] | |||
Resistant Drug | Paclitaxel | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
In Vitro Model | MCF-7 cells | Breast | Homo sapiens (Human) | CVCL_0031 |
SkBR3 cells | Breast | Homo sapiens (Human) | CVCL_0033 | |
MDA-MB-231 cells | Breast | Homo sapiens (Human) | CVCL_0062 | |
BT474 cells | Breast | Homo sapiens (Human) | CVCL_0179 | |
MDA-MB-436 cells | Breast | Homo sapiens (Human) | CVCL_0623 | |
MDA-MB-435 cells | Breast | Homo sapiens (Human) | CVCL_0417 | |
Experiment for Molecule Alteration |
RT-PCR | |||
Experiment for Drug Resistance |
Celltiter 96 aqueous one solution cell proliferation assay | |||
Mechanism Description | miR-125b was up-regulated in Taxol-resistant cells, causing a marked inhibition of Taxol-induced cytotoxicity and apoptosis and a subsequent increase in the resistance to Taxol in cancer cells. The pro-apoptotic Bcl-2 antagonist killer 1 (Bak1) is a direct target of miR-125b. Down-regulation of Bak1 suppressed Taxol-induced apoptosis and led to an increased resistance to Taxol. |
Drug Sensitivity Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Colon cancer | [18] | |||
Sensitive Disease | Colon cancer [ICD-11: 2B90.1] | |||
Sensitive Drug | Paclitaxel | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell apoptosis | Activation | hsa04210 | |
In Vitro Model | HT29 Cells | Colon | Homo sapiens (Human) | CVCL_A8EZ |
HCT116 cells | Colon | Homo sapiens (Human) | CVCL_0291 | |
In Vivo Model | BALB/C nude mouse xenograft model | Mus musculus | ||
Experiment for Molecule Alteration |
RT-PCR | |||
Experiment for Drug Resistance |
MTT assay | |||
Mechanism Description | Overexpression of miR-125a/b significantly inhibited ALDH1A3 and Mcl1 expression, reduced cell survival, and increased cell apoptosis in HT29-taxol cells. Chemoresistance to paclitaxel is initiated by the downregulation of miR-125a/b expression, which subsequently upregulates ALDH1A3 and Mcl1 expression to promote survival of CSCs. | |||
Regulation by the Disease Microenvironment (RTDM) | ||||
Disease Class: Lung cancer | [19] | |||
Sensitive Disease | Lung cancer [ICD-11: 2C25.5] | |||
Sensitive Drug | Paclitaxel | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell proliferation | Inhibition | hsa05200 | |
In Vitro Model | A549 cells | Lung | Homo sapiens (Human) | CVCL_0023 |
H460 cells | Lung | Homo sapiens (Human) | CVCL_0459 | |
Experiment for Molecule Alteration |
RT-PCR | |||
Experiment for Drug Resistance |
CCK8 assay | |||
Mechanism Description | miR-125b was significantly downregulated in A549-PR and H460-PR cells. Notably, ectopic expression of miR-125b led to the reversal of EMT phenotype. Moreover, we found that miR-125b governed PR-induced EMT partly due to down-regulation of its target Sema4C. More importantly, overexpression of miR-125b or depletion of Sema4C sensitized PR cells to paclitaxel. Furthermore, stable overexpression miR-125b in A549-PR cells inhibited tumor xenograft growth in immunodeficient mice. Our study implied that up-regulation of miR-125b could be a novel approach to reverse chemotherapy resistance in lung cancers. |
Temozolomide
Drug Sensitivity Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Glioblastoma | [20] | |||
Sensitive Disease | Glioblastoma [ICD-11: 2A00.02] | |||
Sensitive Drug | Temozolomide | |||
Molecule Alteration | Expression | Down-regulation |
||
Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell apoptosis | Activation | hsa04210 | |
Cell proliferation | Inhibition | hsa05200 | ||
NF-kappaB signaling pathway | Inhibition | hsa04064 | ||
In Vitro Model | U251 cells | Brain | Homo sapiens (Human) | CVCL_0021 |
LN-18 cells | Brain | Homo sapiens (Human) | CVCL_0392 | |
T98G cells | Brain | Homo sapiens (Human) | CVCL_0556 | |
U87-MG cells | Brain | Homo sapiens (Human) | CVCL_0022 | |
HS683 cells | Brain | Homo sapiens (Human) | CVCL_0844 | |
Experiment for Molecule Alteration |
RT-PCR | |||
Experiment for Drug Resistance |
Promega assay | |||
Mechanism Description | A novel mechanism independent of TP53 and MGMT by which oncogenic miR-125b confers TMZ resistance by targeting TNFAIP3 and NkIRAS2. GBM cells overexpressing miR-125b showed increased NF-kB activity and upregulation of anti-apoptotic and cell cycle genes. This was significantly associated with resistance of GBM cells to TNFalpha- and TNF-related inducing ligand-induced apoptosis as well as resistance to TMZ. Conversely, overexpression of anti-miR-125b resulted in cell cycle arrest, increased apoptosis and increased sensitivity to TMZ, indicating that endogenous miR-125b is sufficient to control these processes. GBM cells overexpressing TNFAIP3 and NkIRAS2 were refractory to miR-125b-induced apoptosis resistance as well as TMZ resistance, indicating that both genes are relevant targets of miR-125b. | |||
Disease Class: Glioblastoma | [21] | |||
Sensitive Disease | Glioblastoma [ICD-11: 2A00.02] | |||
Sensitive Drug | Temozolomide | |||
Molecule Alteration | Expression | Down-regulation |
||
Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell migration | Inhibition | hsa04670 | |
In Vitro Model | GSCs cells | Brain | Homo sapiens (Human) | N.A. |
In Vivo Model | Nude mouse xenograft model | Mus musculus | ||
Experiment for Molecule Alteration |
PCR | |||
Experiment for Drug Resistance |
Transwell invasion assay | |||
Mechanism Description | Inhibition of miR-125b expression may enhance sensitivity of GSCs to temozolomide by targeting PIAS3 on cell invasion. |
Trastuzumab
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Regulation by the Disease Microenvironment (RTDM) | ||||
Disease Class: Breast cancer | [22] | |||
Resistant Disease | Breast cancer [ICD-11: 2C60.3] | |||
Resistant Drug | Trastuzumab | |||
Molecule Alteration | Expression | Down-regulation |
||
Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell invasion | Activation | hsa05200 | |
Cell migration | Activation | hsa04670 | ||
Cell viability | Inhibition | hsa05200 | ||
miR125b/HER2/Snail1 signaling pathway | Regulation | hsa05206 | ||
In Vitro Model | SkBR3 cells | Breast | Homo sapiens (Human) | CVCL_0033 |
BT474 cells | Breast | Homo sapiens (Human) | CVCL_0179 | |
In Vivo Model | BALB/c nude mouse xenograft model | Mus musculus | ||
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
MTT assay; Wound-healing assay; Transwell assay | |||
Mechanism Description | TINCR, which is transcriptionally activated by H3k27 acetylation, upregulates HER-2 expression by downregulating miR-125b and TINCR promotes trastuzumab resistance-induced EMT by directly targeting Snail-1. |
Vemurafenib
Drug Sensitivity Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Melanoma | [23] | |||
Sensitive Disease | Melanoma [ICD-11: 2C30.0] | |||
Sensitive Drug | Vemurafenib | |||
Molecule Alteration | Expression | Down-regulation |
||
Experimental Note | Revealed Based on the Cell Line Data | |||
Cell Pathway Regulation | Cell apoptosis | Activation | hsa04210 | |
Cell invasion | Inhibition | hsa05200 | ||
Cell migration | Inhibition | hsa04670 | ||
Cell proliferation | Inhibition | hsa05200 | ||
In Vitro Model | PLX4032-resistant cells | Skin | Homo sapiens (Human) | N.A. |
Experiment for Molecule Alteration |
Western blot analysis | |||
Experiment for Drug Resistance |
MTT assay | |||
Mechanism Description | CCL2 and miR-125b, miR-34a and miR-100 are potential targets for overcoming the miR-34a and miR-100 are potential targets for overcoming the resistance to BRAFi in melanoma. |
Vincristine
Drug Resistance Data Categorized by Their Corresponding Mechanisms | ||||
Epigenetic Alteration of DNA, RNA or Protein (EADR) | ||||
Disease Class: Acute lymphocytic leukemia | [24] | |||
Resistant Disease | Acute lymphocytic leukemia [ICD-11: 2B33.0] | |||
Resistant Drug | Vincristine | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
Cell proliferation | Activation | hsa05200 | ||
In Vitro Model | ETV6-RUNX1-positive Reh cells | Blood | Homo sapiens (Human) | CVCL_1650 |
Experiment for Molecule Alteration |
RT-qPCR | |||
Experiment for Drug Resistance |
MTT assay | |||
Mechanism Description | microRNA-125b (miR-125b), miR-99a and miR-100 are overexpressed in vincristine-resistant acute lymphoblastic leukemia (ALL). | |||
Disease Class: Ewing sarcoma | [11] | |||
Resistant Disease | Ewing sarcoma [ICD-11: 2B52.0] | |||
Resistant Drug | Vincristine | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
miR125b-p53/BAKT signaling pathway | Activation | hsa05206 | ||
In Vitro Model | RD-ES cells | Bones | Homo sapiens (Human) | CVCL_2169 |
Sk-ES cells | Bones | Homo sapiens (Human) | CVCL_0627 | |
Sk-N-MC cells | Bones | Homo sapiens (Human) | CVCL_0530 | |
TC-71 cells | Bones | Homo sapiens (Human) | CVCL_2213 | |
VH-64 cells | Bones | Homo sapiens (Human) | CVCL_9672 | |
WE-68 cells | Bones | Homo sapiens (Human) | CVCL_9717 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
Celltiter-glo luminescent cell viability assay | |||
Mechanism Description | miR-125b led to the development of chemoresistance by suppressing the expression of p53 and Bak, and repression of miR-125b sensitized EWS cells to apoptosis induced by treatment with various cytotoxic drugs. | |||
Disease Class: Primitive neuroectodermal tumor | [11] | |||
Resistant Disease | Primitive neuroectodermal tumor [ICD-11: 2A00.08] | |||
Resistant Drug | Vincristine | |||
Molecule Alteration | Expression | Up-regulation |
||
Experimental Note | Identified from the Human Clinical Data | |||
Cell Pathway Regulation | Cell apoptosis | Inhibition | hsa04210 | |
miR125b-p53/BAKT signaling pathway | Activation | hsa05206 | ||
In Vitro Model | RD-ES cells | Bones | Homo sapiens (Human) | CVCL_2169 |
Sk-ES cells | Bones | Homo sapiens (Human) | CVCL_0627 | |
Sk-N-MC cells | Bones | Homo sapiens (Human) | CVCL_0530 | |
TC-71 cells | Bones | Homo sapiens (Human) | CVCL_2213 | |
VH-64 cells | Bones | Homo sapiens (Human) | CVCL_9672 | |
WE-68 cells | Bones | Homo sapiens (Human) | CVCL_9717 | |
Experiment for Molecule Alteration |
qRT-PCR | |||
Experiment for Drug Resistance |
Celltiter-glo luminescent cell viability assay | |||
Mechanism Description | miR-125b led to the development of chemoresistance by suppressing the expression of p53 and Bak, and repression of miR-125b sensitized EWS cells to apoptosis induced by treatment with various cytotoxic drugs. |
References
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